# -*- coding: utf-8 -*- # This software and supporting documentation are distributed by # Institut Federatif de Recherche 49 # CEA/NeuroSpin, Batiment 145, # 91191 Gif-sur-Yvette cedex # France # # This software is governed by the CeCILL-B license under # French law and abiding by the rules of distribution of free software. # You can use, modify and/or redistribute the software under the # terms of the CeCILL-B license as circulated by CEA, CNRS # and INRIA at the following URL "http://www.cecill.info". # # As a counterpart to the access to the source code and rights to copy, # modify and redistribute granted by the license, users are provided only # with a limited warranty and the software's author, the holder of the # economic rights, and the successive licensors have only limited # liability. # # In this respect, the user's attention is drawn to the risks associated # with loading, using, modifying and/or developing or reproducing the # software by the user in light of its specific status of free software, # that may mean that it is complicated to manipulate, and that also # therefore means that it is reserved for developers and experienced # professionals having in-depth computer knowledge. Users are therefore # encouraged to load and test the software's suitability as regards their # requirements in conditions enabling the security of their systems and/or # data to be ensured and, more generally, to use and operate it in the # same conditions as regards security. # # The fact that you are presently reading this means that you have had # knowledge of the CeCILL-B license and that you accept its terms. from soma import aims import sys graph = aims.read( '/neurospin/lnao/Panabase/data/diffusion/chaos/t1mri/default_acquisition/default_analysis/folds/3.0/base2005_manual/Rchaos_base2005_manual.arg' ) print 'graph:', graph print 'global properties:', graph.keys() print 'nodes:', graph.order() print 'relations:', graph.edgesSize() # iterate on properties for p in graph: print 'property:', p, ', type:', \ ( graph[p].type() if isinstance( graph[p], aims.Object ) \ else type( graph[p] ) ) # iterate on vertices for v in graph.vertices(): print 'vertex:', v.getSyntax(), ', edges:', v.edgesSize() if v.has_key( 'name' ): print ' name:', v[ 'name' ] if v.has_key( 'label' ): print ' label:', v[ 'label' ] try: # access mesh in attribute 'aims_Tmtktri' mesh = v[ 'aims_Tmtktri' ] #mesh = aims.AimsSurfaceTriangle.fromObject( m.get() ) print 'mesh:', mesh, ', polygons:', mesh.polygon().size() except: pass # iterate on edges for e in graph.edges(): print 'edge:', e.getSyntax(), ', links', e.verticesSize(), 'vertices' fileout = '/tmp/toto.arg' print 'writing graph to', fileout w = aims.Writer() w.write( graph, fileout ) print 'object type:', w.writtenObjectType() print 'data type:', w.writtenObjectDataType() print 'full type:', w.writtenObjectFullType()