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Publications of year 2008

Articles in journal or book chapters

  1. J. Andoh, E Artiges, C Pallier, D. Rivière, J.-F. Mangin, M. L. Paillère-Martinot, and J.-L. Martinot. Priming frequencies of transcranial magnetic stimulation over Wernicke's area modulate word detection. Cereb. Cortex, 18(1):210-6, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  2. E. Bardinet, M. Bhattacharjee, D. Dormont, B. Pidoux, G. Malandain, M. Schüpbach, N. Ayache, P. Cornu, Y. Agid, and J. Yelnik. A three-dimensional histological atlas of the human basal ganglia. II. Atlas deformation strategy and evaluation in deep brain stimulation for Parkinson disease. J Neurosurg., October 2008. Keyword(s): IFR49, brainvisa, stereotaxy, UPR 640, U679, Pitié Salpêtrière, CENIR. [bibtex-entry]


  3. L. Bergouignan, M. Chupin, Y. Czechowska, S. Kinkingnéhun, C. Lemognea, G. Le Bastard, M. Lepage, L. Garnero, O. Colliot, and P. Fossati. Can Voxel Based Morphometry, Manual Segmentation and Automated Segmentation Equally Detect Hippocampal Volume Differencies in Acute Depression?. NeuroImage, 2008. Keyword(s): IFR49, brainvisa, UPR 640, U610. [bibtex-entry]


  4. P. Besson, F. Andermann, F. Dubeau, and A. Bernasconi. Small focal cortical dysplasia lesions are located at the bottom of a deep sulcus. Brain, 131(12):3246-3255, 2008. Keyword(s): brainvisa. [bibtex-entry]


  5. A. Cachia, M.-L. Paillère-Martinot, A. Galinowski, D. Januel, R. De Beaurepaire, F. Bellivier, E. Artiges, T. Gallarda, J. Andoh, D. Bartrés-Faz, E. Duchesnay, D. Rivière, Y. Cointepas, M. Plaze, J.-F. Mangin, and J.-L. Martinot. Cortical folding abnormalities in schizophrenia patients with resistant auditory hallucinations. Neuroimage, 39(3):927-935, 2008. Keyword(s): Sulci, Anatomy, brainvisa, IFR49. [bibtex-entry]


  6. S. Chanraud, M. Reynaud, M. Wessa, J. Penttilä, N. Kostogianni, A. Cachia, E. Artiges, F. Delain, M. Perrin, H-J. Aubin, Y. Cointepas, C. Martelli, and J-L. Martinot. Diffusion tensor tractography in mesencephalic bundles: relation to mental flexibility in detoxified alcohol-dependent subjects. Neuropsychopharmacology, 34(5):1223-1232, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  7. F. Chassoux, E. Landre, S. Rodrigo, F. Beuvon, B. Turak, F. Semah, and B. Devaux. Intralesional recordings and epileptogenic zone in focal polymicrogyria. Epilepsia, 49(1):51-64, 2008. Keyword(s): brainvisa. [bibtex-entry]


  8. O. Colliot, G. Chételat, M. Chupin, B. Desgranges, B. Magnin, H. Benali, B. Dubois, L. Garnero, F. Eustache, and S. Lehéricy. Discrimination between Alzheimer Disease, Mild Cognitive Impairment, and Normal Aging by Using Automated Segmentation of the Hippocampus. Radiology, 2008. Keyword(s): IFR49, brainvisa, CENIR, UPR 640, U610, U678. [bibtex-entry]


  9. M.D. Cykowski, O. Coulon, P. Kochunov, K. Amunts, J.L. Lancaster, A.R. Laird, D.C. Glahn, and P.T. Fox. The central sulcus: an observer-independent characterization of sulcal landmarks and depth asymmetry. Cerebral Cortex, 18(9):1999-2009, 2008. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  10. M. D. Cykowski, P Kochunov, R. J. Ingham, J. C. Ingham, J.-F. Mangin, D. Rivière, J.L. Lancaster, and P. T. Fox. Perisylvian Sulcal Morphology and Cerebral Asymmetry Patterns in Adults Who Stutter. Cereb. Cortex, 18(3):571-83, 2008. Keyword(s): Sulci, brainvisa, IFR49. [bibtex-entry]


  11. A. Desbrée, M. Verdurand, J. Godart, A. Dubois, R. Mastrippolito, F. Pain, L. Pinot, T. Delzescaux, H. Gurden, L. Zimmer, and P. Lanièce. Decreased metabolic response to visual stimulation in the superior colliculus of mice lacking the glial glutamate transporter GLT-1. Journal of Nuclear Medicine, 49(7):1155-61, 2008. Keyword(s): IFR49, brainvisa, CEA MIRCen, BrainRAT. [bibtex-entry]


  12. J. Dubois, M. Benders, C. Borradori-Tolsa, A. Cachia, F. Lazeyras, R. Ha-Vinh Leuchter, S.V. Sizonenko, S.K. Warfield, J.-F. Mangin, and P.S. Hüppi. Primary cortical folding in the human newborn: an early marker of later functional development. Brain, 131(8):2028-41, 2008. Keyword(s): Sulci, Anatomy, brainvisa, IFR49. [bibtex-entry]


  13. J. Dubois, M. Benders, A. Cachia, F. Lazeyras, R. Ha-Vinh Leuchter, S.V. Sizonenko, C. Borradori-Tolsa, J.-F. Mangin, and P.S. Hüppi. Mapping the early cortical folding process in the preterm newborn brain. Cereb. Cortex, 18(6):1444-54, 2008. Keyword(s): Sulci, Anatomy, brainvisa, IFR49. [bibtex-entry]


  14. J. Dubois, G. Dehaene-Lambertz, M. Perrin, J.-F. Mangin, Y. Cointepas, E. Duchesnay, D. Le Bihan, and L. Hertz-Pannier. Asynchrony of the early maturation of white matter bundles in healthy infants: quantitative landmarks revealed noninvasively by diffusion tensor imaging. Hum. Brain Mapp., 29(1):14-27, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  15. J. Dubois, G. Dehaene-Lambertz, C. Soarès, Y. Cointepas, D. Le Bihan, and L. Hertz-Pannier. Microstructural correlates of infant functional development: example of the visual pathways. J Neurosci., 28(8):1943-8, 2008. Keyword(s): Diffusion, brainvisa, IFR49. [bibtex-entry]


  16. A. Dubois, A. S. Hérard, G. Flandin, E. Duchesnay, L. Besret, V. Frouin, P. Hantraye, G. Bonvento, and T. Delzescaux. Quantitative validation of voxel-wise statistical analyses of autoradiographic rat brain volumes: application to unilateral visual stimulation. Neuroimage, 40(2):482-494, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  17. S. Epelbaum, P. Pinel, R. Gaillard, C. Delmaire, M. Perrin, S. Dupont, S. Dehaene, and L. Cohen. Pure alexia as a disconnection syndrome: new diffusion imaging evidence for an old concept. Cortex, 44(8):962-74, 2008. Keyword(s): Diffusion, brainvisa, U562, CENIR, UPMC, IFR49. [bibtex-entry]


  18. K. Fissell. Workflow-Based Approaches to Neuroimaging Analysis. environments, 4:6, 2008. Keyword(s): brainvisa. [bibtex-entry]


  19. K.J. Friston, L.M. Harrison, J. Daunizeau, S.J. Kiebel, C. Phillips, N. Trujillo-Barreto, R.N. Henson, G. Flandin, and J. Mattout. Multiple sparse priors for the M/EEG inverse problem. Neuroimage, 39(3):1104-1120, 2008. Keyword(s): brainvisa. [bibtex-entry]


  20. H. Kim, N. Bernasconi, B. Bernhardt, O. Colliot, and A. Bernasconi. Basal temporal sulcal morphology in healthy controls and patients with temporal lobe epilepsy. Neurology, 70(Issue 22, Part 2):2159, 2008. Keyword(s): IFR49, brainvisa, UPR 640. [bibtex-entry]


  21. P. Kochunov, P.M. Thompson, T.R. Coyle, J.L. Lancaster, V. Kochunov, D.R. Royall, J.-F. Mangin, D. Rivière, and P. T. Fox. Relationship among neuroimaging indices of cerebral health during normal aging. Hum. Brain Mapp., 29(1):36-45, 2008. Keyword(s): Sulci, Diffusion, brainvisa, IFR49. [bibtex-entry]


  22. S. Makni, J. Idier, T. Vincent, B. Thirion, G. Dehaene-Lambertz, and P. Ciuciu. A fully Bayesian approach to the parcel-based detection-estimation of brain activity in fMRI. Neuroimage, 41(3):941-969, July 2008. Keyword(s): brainvisa, fMRI, IFR49. [bibtex-entry]


  23. R. Maroy, R. Boisgard, C. Comtat, V. Frouin, P. Cathier, E. Duchesnay, F. Dollé, P. E.Nielsen, R. Trébossen, and B. Tavitian. Segmentation of rodent whole-body dynamic PET images: an unsupervised method based on voxel dynamics. IEEE Trans Med Imaging, 27(3):342-54, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  24. G. Operto, R. Bulot, J.-L. Anton, and O. Coulon. Projection of fMRI data onto the cortical surface using anatomically-informed convolution kernels. Neuroimage, 39(1):127-135, 2008. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  25. M. Perrin, Y. Cointepas, A. Cachia, C. Poupon, B. Thirion, D. Rivière, P. Cathier, V. El Kouby, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Connectivity-Based Parcellation of the Cortical Mantle Using q-Ball Diffusion Imaging. Int J Biomed Imaging, 2008. Keyword(s): Diffusion, brainvisa, IFR49. [bibtex-entry]


  26. C. Poupon, A. Roche, J. Dubois, J.-F. Mangin, and F. Poupon. Real-time MR diffusion tensor and Q-ball imaging using Kalman filtering. Medical Image Analysis, 12(5):527-34, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  27. Y. Shi, P.M. Thompson, I. Dinov, and A.W. Toga. Hamilton--Jacobi Skeleton on Cortical Surfaces. IEEE Trans Med Imaging, 27(5):664-673, 2008. Keyword(s): brainvisa. [bibtex-entry]


  28. P. Zanotti-Fregonara, M. Vidailhet, A. Kas, L.J. Ozelius, F. Clot, E. Hindié, L. Ravasi, J.Y. Devaux, and E. Roze. [(123)I]-FP-CIT and [(99m)Tc]-HMPAO single photon emission computed tomography in a new sporadic case of rapid-onset dystonia-parkinsonism. J Neurol Sci., August 2008. Keyword(s): IFR49, brainvisa, U679, CEA SHFJ. [bibtex-entry]


Conference articles

  1. E. Brunet-Gouet, D. Vistoli, E. Bobin, and C. Passerieux. MEG-EEG correlates of mentalistic and mechanical reasoning in healthy subjects. An analysis of the effects of incongruity. In 14th Human Brain Mapping (OHBM), Melbourne, Australia, June 2008. Keyword(s): brainvisa, meeg. [bibtex-entry]


  2. M. Chupin, G. Chételat, L. Lemieux, B. Dubois, L. Garnero, H. Benali, F. Eustache, S. Lehéricy, B. Desgranges, and O. Colliot. Fully Automatic Hippocampus Segmentation Discriminates between Early Alzheimer's Disease and Normal Aging. In Proc. IEEE ISBI, pages 97-100, 2008. Keyword(s): IFR49, brainvisa, UPR 640, CENIR, U610, U678, UPMC. [bibtex-entry]


  3. M. Chupin, R. Cuingnet, L. Lemieux, S. Lehéricy, H. Benali, L. Garnero, and O. Colliot. Fully Automatic Hippocampus Segmentation Discriminates between Alzheimer's Disease and Normal Aging - Data from the ADNI database. In MICCAI, Computational Anatomy and Physiology of the Hippocampus Workshop, 2008. Keyword(s): IFR49, brainvisa, UPR 640, CENIR, U678. [bibtex-entry]


  4. P. Ciuciu, T. Vincent, A.-L. Fouque, and A. Roche. Improved fMRI group studies based on spatially varying non-parametric BOLD signal modeling. In 5th Proc. IEEE ISBI, Paris, France, pages 1263-1266, May 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  5. M. Cykowski, O. Coulon, P. Kochunov, J. Lancaster, and P. Fox. The postcentral sulcus: depth profiles in sulci grouped by cluster analysis. In 14th Human brain Mapping (OHBM), Melbourne, Australia, 2008. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  6. A. Dubois, J. Dauguet, N. Souedet, A. S. Hérard, D. Rivière, Y. Cointepas, G. Bonvento, P. Hantraye, and T. Delzescaux. BrainRAT: Brain Reconstruction and Analysis Toolbox. a freely available toolbox for the 3D reconstruction of anatomo-functional brain sections in rodents. In 38th annual meeting of the Society for Neuroscience, Washington, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  7. S. Fernandez Vidal, E. Bardinet, M. Bhattacharjee, D. Dormont, C. Karachi, and J. Yelnik. A brainvisa/anatomist visualisation and processing toolbox for deep brain electrode implantation under stereotactic conditions. In CARS 2008, Barcelona, 2008. Keyword(s): IFR49, brainvisa, stereotaxy, UPR 640, U679, Pitié-Salpêtrière, CENIR. [bibtex-entry]


  8. H.Chouk and M.A. Amorin. Les Signatures Neurocognitives du Changement de Point de Vue pour la Reconnaissance des Objets 3D. In 2ème Conférence française de neurosciences computationnelles Neurocomp08, 2008. Keyword(s): brainvisa, meeg. [bibtex-entry]


  9. J. Harwell, H. Bremen, O. Coulon, D. Dierker, R.C. Reynolds, C. Silva, K. Teich, D.C. Van Essen, S.K. Warfield, and Z.S. Saad. GIFTI: Geometry data format for exchange of surface-based brain mapping data. In 14th Human brain Mapping (OHBM), Melbourne, Australia, 2008. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  10. P. Kochunov, D. Glahn, P. Fox, O. Coulon, K. Zilles, w. Shelledy, J. Lancaster, J. Blangero, and J. Rogers. Genetics of cerebral sulcation: does genetics offer a new way of sulcal classification ?. In 14th Human brain Mapping (OHBM), Melbourne, Australia, 2008. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  11. R. Maroy, M. Santiago-Ribeiro, P. Delonlay, F. Brunelle, C. Nihoul-Fékété, B. Tavitian, and R. Trébossen. Automated segmentation for the distinction between forms of hyperinsulinism. In Proc. of European Association of Nuclear Medicine congress, Munich, Germany, 2008. Keyword(s): IFR49, brainvisa, nuclear imaging, CEA SHFJ. [bibtex-entry]


  12. R. Maroy, T. Viel, R. Boisgard, C. Comtat, R. Trébossen, and B. Tavitian. Fast and Accurate PET Preclinical Data Analysis: Segmentation and Partial Volume Effect Correction with no Anatomical priors. In Proc. NSS/MIC, Dresden, Germany, pages 5498-5501, Oct. 2008. Keyword(s): IFR49, brainvisa, nuclear imaging, CEA SHFJ. [bibtex-entry]


  13. G. Operto, C. Clouchoux, R. Bulot, J.-L. Anton, and O. Coulon. Surface-based structural group analysis of fMRI data. In MICCAI, volume 5241, New York, USA, pages 959-966, 2008. Springer-Verlag. Keyword(s): brainvisa, cortical_surface. [bibtex-entry]


  14. Z. Y. Sun, D. Rivière, and E. Duchesnay, B. Thirion, F. Poupon, and J.-F. Mangin. Defining cortical sulcus patterns using partial clustering based on bootstrap and bagging. In 5th Proc. IEEE ISBI, Paris, France, pages 1629-1632, May 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  15. T. Vincent, P. Ciuciu, and B. Thirion. Sensitivity analysis of parcellation in the joint detection-estimation of brain activity in fMRI. In 5th Proc. IEEE ISBI, Paris, France, pages 568-571, May 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  16. D. Vistoli, E. Brunet-Gouet, E. Bobin, C. Passerieux, and M.C. Hardy-Baylé. MEG investigation of intention attribution using a non verbal task: a preliminary study. In 38th Neurosciences Congress (SfN), Washington, November 2008. Keyword(s): brainvisa, meeg. [bibtex-entry]



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