BACK TO INDEX

Publications about 'IFR49'

Thesis

  1. M. Perrot. Reconnaissance Automatique des Sillons Corticaux. PhD thesis, ENS de Cachan, Cachan , France, Oct. 2009. Keyword(s): Sulci, Computer Science, Anatomy, brainvisa, Registration, Markov Random Field, Circular distributions, Riemannian calculus, IFR49. [bibtex-entry]


Articles in journal or book chapters

  1. L. Chaâri, J.-C. Pesquet, A. Benazza-Benyahia, and P. Ciuciu. A wavelet-based regularized reconstruction algorithm for SENSE parallel MRI with applications to neuroimaging. Medical Image Analysis, 15(2):185-201, 2011. Keyword(s): wavelet, parallel MRI, reconstruction, sparsity, brainvisa, IFR49. [bibtex-entry]


  2. C. Leroy, L. Karila, J.-L. Martinot, M. Lukasiewicz, E. Duchesnay, C. Comtat, F. Dollé, A. Benyamina, E. Artiges, M.-J. Ribeiro, M. Reynaud, and C. Trichard. Striatal and extrastriatal dopamine transporter in cannabis and tobacco addiction: a high-resolution PET study. Addiction Biology, 2011. Keyword(s): IFR49, U1000, brainvisa. [bibtex-entry]


  3. L. Chaâri, J.-C. Pesquet, J.-Y. Tourneret, P. Ciuciu, and A. Benazza-Benyahia. A Hierarchical Bayesian Model for Frame Representation. IEEE Trans. Signal Processing, 58(10):-, 2010. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  4. P. Ciuciu, T. Vincent, L. Risser, and Sophie Donnet. A joint detection-estimation framework for analysing within-subject fMRI data. Journal de la Société Francaise de Statistiques, 151(1):58-89, 2010. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  5. L. Risser, T. Vincent, F. Forbes, J. Idier, and P. Ciuciu. Min-max extrapolation scheme for fast estimation of 3D Potts field partition functions. Application to the joint detection-estimation of brain activity in fMRI.. Journal of Signal Processing Systems, 60(1):-, July 2010. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  6. T. Vincent, L. Risser, and P. Ciuciu. Spatially adaptive mixture modeling for analysis of within-subject fMRI time series. IEEE Trans. Med. Imag., 29(4):1059-1074, Apr. 2010. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  7. J. Andoh, D. Rivière, J-F. Mangin, E. Artiges, Y. Cointepas, M-L. Paillère-Martinot, J-L. Martinot, and A. Cachia. A low-cost MRI-guided method for TMS coil positioning. Brain Stimulation, 2:123-131, 2009. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  8. C. Delmaire, M. Vidailhet, D. Wassermann, M. Descoteaux, R. Valabregue, F. Bourdin, C. Lenglet, S. Sangla, A. Terrier, R. Deriche, and S. Lehéricy. Diffusion Abnormalities in the Primary Sensorimotor Pathways in Writer's Cramp. Archives of Neurology, in press, 2009. Keyword(s): IFR49, brainvisa, odyssee, CENIR, U679, U678. [bibtex-entry]


  9. G. Douaud, T. E. Behrens, C. Poupon, Y. Cointepas, S. Jbabdi, V. Gaura, N. Golestani, P. Krystkowiak, C. Verny, P. Damier, A. C. Bachoud-Lévi, P. Hantraye, and P. Remy. In vivo evidence for the selective subcortical degeneration in Huntington's disease. Neuroimage, 46(4):958-966, 2009. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  10. J. Dubois, L. Hertz-Pannier, A. Cachia, J.-F. Mangin, D. Le Bihan, and G. Dehaene-Lambertz. Structural asymmetries in the infant language and sensori-motor networks. Cereb. Cortex, 19(2):414-423, 2009. Keyword(s): Diffusion, brainvisa, IFR49. [bibtex-entry]


  11. M. Fouquet, B. Desgranges, B. Landeau, E. Duchesnay, F. Mézenge, V. de la Sayette, F. Viader, J.-C. Baron, F. Eustache, and G. Chételat. Longitudinal brain metabolic changes from amnestic Mild Cognitive Impairment to Alzheimer’s Disease. Brain, 132:2058-2067, 2009. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  12. J. Andoh, E Artiges, C Pallier, D. Rivière, J.-F. Mangin, M. L. Paillère-Martinot, and J.-L. Martinot. Priming frequencies of transcranial magnetic stimulation over Wernicke's area modulate word detection. Cereb. Cortex, 18(1):210-6, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  13. E. Bardinet, M. Bhattacharjee, D. Dormont, B. Pidoux, G. Malandain, M. Schüpbach, N. Ayache, P. Cornu, Y. Agid, and J. Yelnik. A three-dimensional histological atlas of the human basal ganglia. II. Atlas deformation strategy and evaluation in deep brain stimulation for Parkinson disease. J Neurosurg., October 2008. Keyword(s): IFR49, brainvisa, stereotaxy, UPR 640, U679, Pitié Salpêtrière, CENIR. [bibtex-entry]


  14. L. Bergouignan, M. Chupin, Y. Czechowska, S. Kinkingnéhun, C. Lemognea, G. Le Bastard, M. Lepage, L. Garnero, O. Colliot, and P. Fossati. Can Voxel Based Morphometry, Manual Segmentation and Automated Segmentation Equally Detect Hippocampal Volume Differencies in Acute Depression?. NeuroImage, 2008. Keyword(s): IFR49, brainvisa, UPR 640, U610. [bibtex-entry]


  15. A. Cachia, M.-L. Paillère-Martinot, A. Galinowski, D. Januel, R. De Beaurepaire, F. Bellivier, E. Artiges, T. Gallarda, J. Andoh, D. Bartrés-Faz, E. Duchesnay, D. Rivière, Y. Cointepas, M. Plaze, J.-F. Mangin, and J.-L. Martinot. Cortical folding abnormalities in schizophrenia patients with resistant auditory hallucinations. Neuroimage, 39(3):927-935, 2008. Keyword(s): Sulci, Anatomy, brainvisa, IFR49. [bibtex-entry]


  16. S. Chanraud, M. Reynaud, M. Wessa, J. Penttilä, N. Kostogianni, A. Cachia, E. Artiges, F. Delain, M. Perrin, H-J. Aubin, Y. Cointepas, C. Martelli, and J-L. Martinot. Diffusion tensor tractography in mesencephalic bundles: relation to mental flexibility in detoxified alcohol-dependent subjects. Neuropsychopharmacology, 34(5):1223-1232, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  17. O. Colliot, G. Chételat, M. Chupin, B. Desgranges, B. Magnin, H. Benali, B. Dubois, L. Garnero, F. Eustache, and S. Lehéricy. Discrimination between Alzheimer Disease, Mild Cognitive Impairment, and Normal Aging by Using Automated Segmentation of the Hippocampus. Radiology, 2008. Keyword(s): IFR49, brainvisa, CENIR, UPR 640, U610, U678. [bibtex-entry]


  18. M. D. Cykowski, P Kochunov, R. J. Ingham, J. C. Ingham, J.-F. Mangin, D. Rivière, J.L. Lancaster, and P. T. Fox. Perisylvian Sulcal Morphology and Cerebral Asymmetry Patterns in Adults Who Stutter. Cereb. Cortex, 18(3):571-83, 2008. Keyword(s): Sulci, brainvisa, IFR49. [bibtex-entry]


  19. A. Desbrée, M. Verdurand, J. Godart, A. Dubois, R. Mastrippolito, F. Pain, L. Pinot, T. Delzescaux, H. Gurden, L. Zimmer, and P. Lanièce. Decreased metabolic response to visual stimulation in the superior colliculus of mice lacking the glial glutamate transporter GLT-1. Journal of Nuclear Medicine, 49(7):1155-61, 2008. Keyword(s): IFR49, brainvisa, CEA MIRCen, BrainRAT. [bibtex-entry]


  20. J. Dubois, M. Benders, C. Borradori-Tolsa, A. Cachia, F. Lazeyras, R. Ha-Vinh Leuchter, S.V. Sizonenko, S.K. Warfield, J.-F. Mangin, and P.S. Hüppi. Primary cortical folding in the human newborn: an early marker of later functional development. Brain, 131(8):2028-41, 2008. Keyword(s): Sulci, Anatomy, brainvisa, IFR49. [bibtex-entry]


  21. J. Dubois, M. Benders, A. Cachia, F. Lazeyras, R. Ha-Vinh Leuchter, S.V. Sizonenko, C. Borradori-Tolsa, J.-F. Mangin, and P.S. Hüppi. Mapping the early cortical folding process in the preterm newborn brain. Cereb. Cortex, 18(6):1444-54, 2008. Keyword(s): Sulci, Anatomy, brainvisa, IFR49. [bibtex-entry]


  22. J. Dubois, G. Dehaene-Lambertz, M. Perrin, J.-F. Mangin, Y. Cointepas, E. Duchesnay, D. Le Bihan, and L. Hertz-Pannier. Asynchrony of the early maturation of white matter bundles in healthy infants: quantitative landmarks revealed noninvasively by diffusion tensor imaging. Hum. Brain Mapp., 29(1):14-27, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  23. J. Dubois, G. Dehaene-Lambertz, C. Soarès, Y. Cointepas, D. Le Bihan, and L. Hertz-Pannier. Microstructural correlates of infant functional development: example of the visual pathways. J Neurosci., 28(8):1943-8, 2008. Keyword(s): Diffusion, brainvisa, IFR49. [bibtex-entry]


  24. A. Dubois, A. S. Hérard, G. Flandin, E. Duchesnay, L. Besret, V. Frouin, P. Hantraye, G. Bonvento, and T. Delzescaux. Quantitative validation of voxel-wise statistical analyses of autoradiographic rat brain volumes: application to unilateral visual stimulation. Neuroimage, 40(2):482-494, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  25. S. Epelbaum, P. Pinel, R. Gaillard, C. Delmaire, M. Perrin, S. Dupont, S. Dehaene, and L. Cohen. Pure alexia as a disconnection syndrome: new diffusion imaging evidence for an old concept. Cortex, 44(8):962-74, 2008. Keyword(s): Diffusion, brainvisa, U562, CENIR, UPMC, IFR49. [bibtex-entry]


  26. H. Kim, N. Bernasconi, B. Bernhardt, O. Colliot, and A. Bernasconi. Basal temporal sulcal morphology in healthy controls and patients with temporal lobe epilepsy. Neurology, 70(Issue 22, Part 2):2159, 2008. Keyword(s): IFR49, brainvisa, UPR 640. [bibtex-entry]


  27. P. Kochunov, P.M. Thompson, T.R. Coyle, J.L. Lancaster, V. Kochunov, D.R. Royall, J.-F. Mangin, D. Rivière, and P. T. Fox. Relationship among neuroimaging indices of cerebral health during normal aging. Hum. Brain Mapp., 29(1):36-45, 2008. Keyword(s): Sulci, Diffusion, brainvisa, IFR49. [bibtex-entry]


  28. S. Makni, J. Idier, T. Vincent, B. Thirion, G. Dehaene-Lambertz, and P. Ciuciu. A fully Bayesian approach to the parcel-based detection-estimation of brain activity in fMRI. Neuroimage, 41(3):941-969, July 2008. Keyword(s): brainvisa, fMRI, IFR49. [bibtex-entry]


  29. R. Maroy, R. Boisgard, C. Comtat, V. Frouin, P. Cathier, E. Duchesnay, F. Dollé, P. E.Nielsen, R. Trébossen, and B. Tavitian. Segmentation of rodent whole-body dynamic PET images: an unsupervised method based on voxel dynamics. IEEE Trans Med Imaging, 27(3):342-54, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  30. M. Perrin, Y. Cointepas, A. Cachia, C. Poupon, B. Thirion, D. Rivière, P. Cathier, V. El Kouby, A. Constantinesco, D. Le Bihan, and J.-F. Mangin. Connectivity-Based Parcellation of the Cortical Mantle Using q-Ball Diffusion Imaging. Int J Biomed Imaging, 2008. Keyword(s): Diffusion, brainvisa, IFR49. [bibtex-entry]


  31. C. Poupon, A. Roche, J. Dubois, J.-F. Mangin, and F. Poupon. Real-time MR diffusion tensor and Q-ball imaging using Kalman filtering. Medical Image Analysis, 12(5):527-34, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  32. P. Zanotti-Fregonara, M. Vidailhet, A. Kas, L.J. Ozelius, F. Clot, E. Hindié, L. Ravasi, J.Y. Devaux, and E. Roze. [(123)I]-FP-CIT and [(99m)Tc]-HMPAO single photon emission computed tomography in a new sporadic case of rapid-onset dystonia-parkinsonism. J Neurol Sci., August 2008. Keyword(s): IFR49, brainvisa, U679, CEA SHFJ. [bibtex-entry]


  33. M. Chupin, A.R. Mukuna Bantumbakulu, D. Hasboun, E. Bardinet, S. Baillet, S. Kinkingnéhun, L. Lemieux, B. Dubois, and L. Garnero. Automated Segmentation of the Hippocampus and the Amygdala Driven by Competition and Anatomical Priors: Method and Validation on Healthy Subjects and Patients with Alzheimer's Disease. NeuroImage, 34:996-1019, 2007. Keyword(s): IFR49, brainvisa, UPR 640, CENIR, U610. [bibtex-entry]


  34. J. Dauguet, T. Delzescaux, F. Condé, J.-F. Mangin, N. Ayache, P. Hantraye, and V. Frouin. Three-dimensional reconstruction of stained histological slices and 3D non-linear registration with in-vivo MRI for whole baboon brain. J Neurosci Methods, 164(1):191-204, 2007. Keyword(s): Registration, brainvisa, IFR49. [bibtex-entry]


  35. A. Dubois, J. Dauguet, A.S. Hérard, L. Besret, E. Duchesnay, V. Frouin, P. Hantraye, G. Bonvento, and T. Delzescaux. Automated three-dimensional analysis of histological and autoradiographic rat brain sections: application to an activation study. J Cereb Blood Flow Metab., 27(10):1742-55, 2007. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  36. E. Duchesnay, A. Cachia, A. Roche, D. Rivière, Y. Cointepas, D. Papadopoulos-Orfanos, M. Zilbovicius, J.-L. Martinot, and J.-F. Mangin. Classification from cortical folding patterns. IEEE Trans. Med. Imag., 26(4):553-565, 2007. Keyword(s): Classification, Sulci, Anatomy, brainvisa, IFR49. [bibtex-entry]


  37. N. Golestani, N. Molko, S. Dehaene, D. Le Bihan, and C. Pallier. Brain Structure Predicts the Learning of Foreign Speech Sounds. Cerebral Cortex, 17(3):575, 2007. Keyword(s): IFR49, brainvisa, U562, CEA Neurospin. [bibtex-entry]


  38. J. Houenou, M. Wessa, G. Douaud, M. Leboyer, S. Chanraud, M. Perrin, C. Poupon, J.-L. Martinot, and M.-L. Paillère-Martinot. Increased white matter connectivity in euthymic bipolar patients: diffusion tensor tractography between the subgenual cingulate and the amygdalo-hippocampal complex. Mol Psychiatry, 12(11):1001-10, 2007. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  39. A. Kas, P. Payoux, M. O. Habert, Z. Malek, Y. Cointepas, G El Fakhri, P. Chaumet-Riffaud, E. Itti, and P. Remy. Validation of a standardized normalization template for statistical parametric mapping analysis of 123I-FP-CIT images. J Nucl Med, 48(9):1459-67, 2007. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  40. M. Noulhiane, P. Piolino, D. Hasboun, S. Clemenceau, M. Baulac, and S. Samson. Autobiographical memory after temporal lobe resection: neuropsychological and MRI volumetric findings. Brain, 130(12):3184, 2007. Keyword(s): IFR49, brainvisa, UPR 640, AP-HP Necker Enfants Malades. [bibtex-entry]


  41. A. Roche, S. Mériaux, M. Keller, and B. Thirion. Mixed-effects statistics for group analysis in fMRI: A nonparametric maximum likelihood approach. Neuroimage, 38:501-510, 2007. Keyword(s): brainvisa, fMRI, IFR49. [bibtex-entry]


  42. J. Yelnik, E. Bardinet, D. Dormont, G. Malandain, S. Ourselin, D. Tandé, C. Karachi, N. Ayache, P. Cornu, and Y. Agid. A three-dimensional, histological and deformable atlas of the human basal ganglia. I. Atlas construction based on immunohistochemical and MRI data. Neuroimage, 34(2):618-38, January 2007. Keyword(s): IFR49, brainvisa, stereotaxy, CENIR, UPR 640, U679, Pitié Salpêtrière. [bibtex-entry]


  43. J Andoh, E Artiges, Ch. Pallier, D. Rivière, J.-F. Mangin, A. Cachia, M Plaze, M-L Paillère-Martinot, and J.-L. Martinot. Modulation of language areas with functional MR image-guided magnetic stimulation. Neuroimage, 29(2):619-627, 2006. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  44. T.R. Coyle, P. Kochunov, R. D. Patel, F. G. Nery, J.L. Lancaster, J.-F. Mangin, D. Rivière, D.R. Pillow, G.J. Davis, M.A. Nicoletti, E. Serap Monkul, P.T. Fox, and J.C. Soares. Cortical sulci and bipolar disorder. Neuroreport, 17(16):1739-42, 2006. Keyword(s): Sulci, brainvisa, IFR49. [bibtex-entry]


  45. J. Dubois, L. Hertz-Pannier, G. Dehaene-Lambertz, Y. Cointepas, and D. Le Bihan. Assessment of the early organization and maturation of infants' cerebral white matter fiber bundles: a feasibility study using quantitative diffusion tensor imaging and tractography. Neuroimage, 30(4):1121-32, 2006. Keyword(s): Diffusion, brainvisa, IFR49. [bibtex-entry]


  46. J. Dubois, C. Poupon, F. Lethimonnier, and D. Le Bihan. Optimized diffusion gradient orientation schemes for corrupted clinical DTI data sets. MAGMA, 19(3):134-43, 2006. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  47. G. El Fakhri, M.O. Habert, P. Maksud, A. Kas, Z. Malek, M.F. Kijewski, and L. Lacomblez. Quantitative simultaneous (99m) Tc-ECD/123I-FP-CIT SPECT in Parkinson's disease and multiple system atrophy. Eur J Nucl Med Mol Imaging, 33(1):87-92, 2006. Keyword(s): IFR49, brainvisa, U678, CEA SHFJ. [bibtex-entry]


  48. C. Grova, J. Daunizeau, J.M. Lina, C.G. Bénar, H. Benali, and J. Gotman. Evaluation of EEG localization methods using realistic simulations of interictal spikes. Neuroimage, 29(3):734-753, 2006. Keyword(s): IFR49, brainvisa, U678. [bibtex-entry]


  49. A.S. Hérard, L. Besret, A. Dubois, J. Dauguet, T. Delzescaux, P. Hantraye, G. Bonvento, and K.L. Moya. siRNA targeted against amyloid precursor protein impairs synaptic activity in vivo. Neurobiology of Aging, 27(12):1740-1750, 2006. Keyword(s): IFR49, brainvisa, UMR 2210, CEA MIRCen. [bibtex-entry]


  50. F. Bonneville, M.L. Welter, C. Elie, S.T. du Montcel, D. Hasboun, C. Menuel, J.L. Houeto, A.M. Bonnet, V. Mesnage, and B. Pidoux. Parkinson disease, brain volumes, and subthalamic nucleus stimulation. Neurology, 64(9):1598-1604, 2005. Keyword(s): IFR49, brainvisa, UPR 640. [bibtex-entry]


  51. F. Buffon, N. Molko, D. Hervé, R. Porcher, I. Denghien, S. Pappata, D. Le Bihan, M. G. Bousser, and H. Chabriat. Longitudinal diffusion changes in cerebral hemispheres after MCA infarcts. J Cereb Blood Flow Metab, 25(5):641-50, 2005. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  52. A.S. Hérard, A. and Dubois, C. Escartin, K. Tanaka, T. Delzescaux, P. Hantraye, and G. Bonvento. Decreased metabolic response to visual stimulation in the superior colliculus of mice lacking the glial glutamate transporter GLT-1. European Journal of Neuroscience, 22(7):1807-11, 2005. Keyword(s): IFR49, brainvisa, CEA MIRCen, BrainRAT. [bibtex-entry]


  53. P. Kochunov, J.-F. Mangin, T.R. Coyle, J.L. Lancaster, P.M. Thompson, D. Rivière, Y. Cointepas, J. Régis, A. Schlosser, D.R. Royall, K. Zilles, J. Mazziotta, A.W. Toga, and P. T. Fox. Age-related morphology trends of cortical sulci. Hum Brain Mapp., 26(3):210-220, 2005. Keyword(s): Sulci, brainvisa, IFR49. [bibtex-entry]


  54. M. Thiebaut de Schotten, M. Urbanski, H. Duffau, E. Volle, R. Lévy, B. Dubois, and P. Bartolomeo. Direct Evidence for a Parietal-Frontal Pathway Subserving Spatial Awareness in Humans. Science, 309:2226, 2005. Keyword(s): IFR49, brainvisa, U678, U610. [bibtex-entry]


  55. J.-F. Mangin, F. Poupon, E. Duchesnay, D. Rivière, A. Cachia, D. L. Collins, A. C. Evans, and J. Régis. Brain Morphometry using 3D Moment Invariants. Medical Image Analysis, 8:187-196, 2004. Keyword(s): Sulci, brainvisa, IFR49. [bibtex-entry]


  56. J.-F. Mangin, D. Rivière, A. Cachia, E. Duchesnay, Y. Cointepas, D. Papadopoulos-Orfanos, D. L. Collins, A. C. Evans, and J. Régis. Object-based morphometry of the cerebral cortex. IEEE Trans. Med. Imag., 23(8):968-982, Aug. 2004. Keyword(s): Sulci, brainvisa, IFR49. [bibtex-entry]


  57. J.-F. Mangin, D. Rivière, O. Coulon, C. Poupon, A. Cachia, Y. Cointepas, J.-B. Poline, D. Le Bihan, J. Régis, and D. Papadopoulos-Orfanos. Coordinate-based versus structural approaches to brain image analysis. Artificial Intelligence in Medicine, 30:177-197, 2004. Keyword(s): Sulci, Diffusion, Scalespace, Anatomy, brainvisa, IFR49. [bibtex-entry]


  58. T. Ochiai, S. Grimault, D. Scavarda, G. Roch, T. Hori, D. Rivière, J.-F. Mangin, and J. Régis. Sulcal pattern and morphology of the superior temporal sulcus. Neuroimage, 22(2):706-719, 2004. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  59. A. Cachia, J.-F. Mangin, D. Rivière, D. Papadopoulos-Orfanos, F. Kherif, I. Bloch, and J. Régis. A generic framework for parcellation of the cortical surface into gyri using geodesic Voronoi diagrams. Medical Image Analysis, 7(4):403-416, 2003. Keyword(s): Sulci, Segmentation, brainvisa, IFR49. [bibtex-entry]


  60. O. David, L. Garnero, D. Cosmelli, and F. Varela. Estimation of Neural Dynamics from MEG/EEG Cortical Current Density Maps : Application to the Reconstruction of Large-Scale Cortical Synchrony. IEEE Transactions on Biomedical Engineering, 49(9):975-987, 2002. Keyword(s): IFR49, UPR 640, brainvisa. [bibtex-entry]


  61. D. Rivière, J.-F. Mangin, D. Papadopoulos-Orfanos, J.-M. Martinez, V. Frouin, and J. Régis. Automatic recognition of cortical sulci of the Human Brain using a congregation of neural networks. Medical Image Analysis, 6(2):77-92, 2002. Keyword(s): Sulci, brainvisa, IFR49. [bibtex-entry]


  62. J.-F. Mangin, V. Frouin, I. Bloch, J. Régis, and J. Lopez-Krahe. From 3D Magnetic Resonance Images to Structural Representations of the Cortex Topography Using Topology Preserving Deformations. Journal of Mathematical Imaging and Vision, 5(4):297-318, 1995. Keyword(s): Sulci, brainvisa, IFR49. [bibtex-entry]


Conference articles

  1. L. Chaâri, F. Forbes, P. Ciuciu, T. Vincent, and M. Dojat. Bayesian variational approximation for the joint Detection-Estimation of brain activity in fMRI. In IEEE Workshop on Statistical Signal Processing (SSP 2011), Nice, France, June 2011. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  2. L. Chaâri, J.-C. Pesquet, J.-Y. Tourneret, and P. Ciuciu. Parameter estimation for hybrid wavelet Total Variation regularization. In IEEE Workshop on Statistical Signal Processing (SSP 2011), Nice, France, June 2011. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  3. D. Geffroy, D. Rivière, I. Denghien, N. Souedet, S. Laguitton, and Y. Cointepas. BrainVISA: a complete software platform for neuroimaging. In Python in Neuroscience workshop, Paris, Aug. 2011. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  4. S. Laguitton, D. Rivière, D. Geffroy, N. Souedet, and Y. Cointepas. Soma-Workflow: open source software for easy access to parallel computing resources. In Proc. 17th HBM, 2011. Keyword(s): parallel computing, brainvisa, IFR49. [bibtex-entry]


  5. S. Badillo, S. Desmidt, and P. Ciuciu. A group level fMRI comparative study between 12 and 32 channel coils at 3 Tesla. In D Le Bihan, editor, 16thProc. HBM'10, Barcelona, Espania, June 2010. Elsevier. Keyword(s): parallel MRI, SENSE, coil comparison, brainvisa, IFR49. [bibtex-entry]


  6. L. Chaâri, S. Mériaux, J.-C. Pesquet, and P. Ciuciu. Impact of the parallel imaging reconstruction algorithm on brain activity detection in fMRI. In IEEE ISABEL'10 Symposium, Roma, Italia, Nov. 2010. Keyword(s): wavelet, parallel MRI, reconstruction, sparsity, brainvisa, IFR49. [bibtex-entry]


  7. L. Chaâri, S. Mériaux, J.-C. Pesquet, and P. Ciuciu. Impact of the parallel imaging reconstruction algorithm on the statistical sensitivity in fMRI. In D Le Bihan, editor, 16thProc. HBM'10, Barcelona, Espania, June 2010. Elsevier. Keyword(s): wavelet, parallel MRI, reconstruction, sparsity, brainvisa, IFR49. [bibtex-entry]


  8. L. Chaâri, J.-C. Pesquet, Amel Benazza-Benyahia, and P. Ciuciu. A hierarchical Bayesian model for frame representation. In 35th Proc. IEEE ICASSP, Dallas, TX, USA, pages 4086-4089, Mar. 2010. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  9. P. Ciuciu, S. Desmidt, T. Vincent, S. Roger, B. Thirion, and A. Roche. What is the statistical difference between SPM5 and the BrainVISA fMRI toolbox?. In D Le Bihan, editor, 16thProc. HBM'10, Barcelona, Espania, June 2010. Elsevier. Keyword(s): parallel MRI, SENSE, coil comparison, brainvisa, IFR49. [bibtex-entry]


  10. Y. Cointepas, D. Geffroy, N. Souedet, I. Denghien, and D. Rivière. The BrainVISA project: a shared software development infrastructure for biomedical imaging research. In Proc. 16th HBM, 2010. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  11. T. Vincent, A. Tucholka, and P. Ciuciu. Surface-based joint detection-estimation of brain activity in functional MRI. In D Le Bihan, editor, 16thProc. HBM'10, Barcelona, Espania, June 2010. Elsevier. Keyword(s): JDE, HRF, Bayesian, MCMC, cortical surface, brainvisa, IFR49. [bibtex-entry]


  12. P. Ciuciu, S. Sockeel, T. Vincent, and J. Idier. Modelling the neurovascular habituation effect on fMRI time series. In 34th Proc. IEEE ICASSP, Taipei, Taiwan, pages 433-436, Apr. 2009. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  13. L. Favre, A.-L. Fouque, T. Vincent, A. Tucholka, M. Keller, G. Operto, B. Thyreau, C. Clouchoux, L. Risser, A. Moreno, D. Geffroy, Y. Cointepas, O. Coulon, P. Ciuciu, B. Thirion, and A. Roche. A Comprehensive fMRI Processing Toolbox for BrainVISA. In Hum. Brain Mapp., 2009. Keyword(s): brainvisa, fMRI, IFR49. [bibtex-entry]


  14. A.-L. Fouque, P. Ciuciu, and L. Risser. Multivariate spatial Gaussian mixture modeling for statistical clustering of hemodynamic parameters in functional MRI. In 34th Proc. IEEE ICASSP, Taipei, Taiwan, pages 445-448, Apr. 2009. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  15. L. Risser, J. Idier, and P. Ciuciu. Bilinear extrapolation scheme For Fast Estimation of 3D Ising Field Partition Function. Application to fMRI Time Course Analysis.. In 16th Proc. IEEE ICIP, Cairo, Egypt, pages 833-836, Nov. 2009. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  16. L. Risser, T. Vincent, and P. Ciuciu. Schéma d'extrapolation de fonctions de partition de champs de Potts. Application l'analyse d'images en IRMf. In Actes du 22$^{\mathrm{e}}$ colloque GRETSI, Dijon, France, Sep. 2009. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  17. T. Vincent, L. Risser, P. Ciuciu, and J. Idier. Spatially unsupervised analysis of within-subject fMRI data using multiple extrapolations of 3D Ising field partition functions. In 2009 IEEE international workshop on Machine Learning for Signal Processing, Grenoble, France, Sep. 2009. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  18. T. Vincent, L. Risser, J. Idier, and P. Ciuciu. Spatially adaptive mixture modelling for analysis of fMRI time series. In Proc. 15th HBM, San Francisco, CA, USA, June 2009. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  19. M. Chupin, G. Chételat, L. Lemieux, B. Dubois, L. Garnero, H. Benali, F. Eustache, S. Lehéricy, B. Desgranges, and O. Colliot. Fully Automatic Hippocampus Segmentation Discriminates between Early Alzheimer's Disease and Normal Aging. In Proc. IEEE ISBI, pages 97-100, 2008. Keyword(s): IFR49, brainvisa, UPR 640, CENIR, U610, U678, UPMC. [bibtex-entry]


  20. M. Chupin, R. Cuingnet, L. Lemieux, S. Lehéricy, H. Benali, L. Garnero, and O. Colliot. Fully Automatic Hippocampus Segmentation Discriminates between Alzheimer's Disease and Normal Aging - Data from the ADNI database. In MICCAI, Computational Anatomy and Physiology of the Hippocampus Workshop, 2008. Keyword(s): IFR49, brainvisa, UPR 640, CENIR, U678. [bibtex-entry]


  21. P. Ciuciu, T. Vincent, A.-L. Fouque, and A. Roche. Improved fMRI group studies based on spatially varying non-parametric BOLD signal modeling. In 5th Proc. IEEE ISBI, Paris, France, pages 1263-1266, May 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  22. A. Dubois, J. Dauguet, N. Souedet, A. S. Hérard, D. Rivière, Y. Cointepas, G. Bonvento, P. Hantraye, and T. Delzescaux. BrainRAT: Brain Reconstruction and Analysis Toolbox. a freely available toolbox for the 3D reconstruction of anatomo-functional brain sections in rodents. In 38th annual meeting of the Society for Neuroscience, Washington, 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  23. S. Fernandez Vidal, E. Bardinet, M. Bhattacharjee, D. Dormont, C. Karachi, and J. Yelnik. A brainvisa/anatomist visualisation and processing toolbox for deep brain electrode implantation under stereotactic conditions. In CARS 2008, Barcelona, 2008. Keyword(s): IFR49, brainvisa, stereotaxy, UPR 640, U679, Pitié-Salpêtrière, CENIR. [bibtex-entry]


  24. R. Maroy, M. Santiago-Ribeiro, P. Delonlay, F. Brunelle, C. Nihoul-Fékété, B. Tavitian, and R. Trébossen. Automated segmentation for the distinction between forms of hyperinsulinism. In Proc. of European Association of Nuclear Medicine congress, Munich, Germany, 2008. Keyword(s): IFR49, brainvisa, nuclear imaging, CEA SHFJ. [bibtex-entry]


  25. R. Maroy, T. Viel, R. Boisgard, C. Comtat, R. Trébossen, and B. Tavitian. Fast and Accurate PET Preclinical Data Analysis: Segmentation and Partial Volume Effect Correction with no Anatomical priors. In Proc. NSS/MIC, Dresden, Germany, pages 5498-5501, Oct. 2008. Keyword(s): IFR49, brainvisa, nuclear imaging, CEA SHFJ. [bibtex-entry]


  26. Z. Y. Sun, D. Rivière, and E. Duchesnay, B. Thirion, F. Poupon, and J.-F. Mangin. Defining cortical sulcus patterns using partial clustering based on bootstrap and bagging. In 5th Proc. IEEE ISBI, Paris, France, pages 1629-1632, May 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  27. T. Vincent, P. Ciuciu, and B. Thirion. Sensitivity analysis of parcellation in the joint detection-estimation of brain activity in fMRI. In 5th Proc. IEEE ISBI, Paris, France, pages 568-571, May 2008. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  28. M. Chupin, A. Hammers, E. Bardinet, O. Colliot, R.S.N. Liu, J.S. Duncan, L. Garnero, and L. Lemieux. Fully Automatic Segmentation of the Hippocampus and the Amygdala from MRI Using Hybrid Prior Knowledge. In MICCAI, 2007. Keyword(s): IFR49, brainvisa, UPR 640, CENIR. [bibtex-entry]


  29. P. Kochunov, J. Lancaster, S. Narayana, G. Operto, O. Coulon, J.F. Mangin, and P. Fox. Relationship between regional FDG uptake and other markers of cerebral health in normal aging. In Hum. Brain Mapp., Chicago, USA, 2007. Keyword(s): brainvisa, cortical_surface, IFR49. [bibtex-entry]


  30. P. Kochunov, J. Rogers, D. Glahn, J. Lancaster, O. Coulon, J.F. Mangin, D. Rivière, J. Blangero, and P. Fox. Genetic analysis of cerebral volume and cortical sulci in baboons. In Hum. Brain Mapp., Chicago, USA, 2007. Keyword(s): brainvisa, cortical_surface, IFR49. [bibtex-entry]


  31. J.-F. Mangin, V. El Kouby, P. Guevara, M. Perrin, P. Cathier, Y. Cointepas, and C. Poupon. The structural paradigm when analyzing diffusion data. In the SNDS bi-national workshop on “MRI of brain connectivity and microstructure: measurement and validation”, Dead Sea, Israel, 2007. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  32. C. Poupon, F. Poupon, A. Roche, Y. Cointepas, J. Dubois, and J.-F. Mangin. Real-time MR diffusion tensor and Q-ball imaging using Kalman filtering. In 10th Proc. MICCAI, LNCS Springer Verlag, pages 27-35, 2007. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  33. Z. Y. Sun, D. Rivière, F. Poupon, J. Régis, and J.-F. Mangin. Automatic inference of sulcus patterns using 3D moment invariants. In 10th Proc. MICCAI, LNCS Springer Verlag, pages 515-22, 2007. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  34. T. Vincent, P. Ciuciu, and J. Idier. Application and validation of spatial mixture modelling for the joint detection-estimation of brain activity in fMRI. In Proc. of the 29th IEEE EMBS Annual international conference, Lyon , France, pages 5218-5222, Aug. 2007. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  35. T. Vincent, P. Ciuciu, and J. Idier. Spatial mixture modelling for the joint detection-estimation of brain activity in fMRI. In 32th Proc. IEEE ICASSP, volume I, Honolulu, Hawaii, pages 325-328, Apr. 2007. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  36. A. Barbot, D. P. Schwartz, K. N'Diaye, A. Bellio, J. Mattout, M. Pélégrini, Y. Cointepas, D. Rivière, and A. Ducorps. A MEG/EEG analysis toolbox for BrainVISA. In Hum. Brain Mapp., Florence, 2006. Keyword(s): brainvisa, meeg, IFR49. [bibtex-entry]


  37. M. Chupin, D. Hasboun, A.R. Mukuna Bantumbakulu, E. Bardinet, S. Baillet, S. Kinkingnéhun, L. Lemieux, B. Dubois, and L. Garnero. Competitive Segmentation of the Hippocampus and the Amygdala from MRI Data: Validation on Young Healthy Controls and Alzheimer's Disease Patients. In SPIE Medical Imaging, volume 6144, 2006. Keyword(s): IFR49, brainvisa, UPR 640, CENIR, U610. [bibtex-entry]


  38. C. Clouchoux, O. Coulon, J.-L Anton, and J.-F. Mangin, and J. Régis. A new cortical surface parcellation model and its automatic implementation. In Proc. 9th MICCAI, LNCS 4191, Copenhaegen, Denmark, pages 193-200, Oct. 2006. Springer Verlag. Keyword(s): brainvisa, cortical_surface, IFR49. [bibtex-entry]


  39. C. Clouchoux, O. Coulon, G. Operto, D. Rivière, K. Dauchot, A. Sirigu, and J.L. Anton. Cortical localization via hemisphere surface parameterization. In Human Brain Mapping, Florence, Italy, 2006. Keyword(s): brainvisa, cortical_surface, IFR49. [bibtex-entry]


  40. H. Gurden, F. Pain, M. Guillermier, A. Dubois, T. Delzescaux, A. Desbrée, R. Mastrippolito, P. Hantraye, G. Bonvento, and P. Lanièce. Metabolic and vascular changes induced in mice olfactory glomeruli by odor presentation. In Forum of European Neuroscience, Vienna, Austria, 2006. Keyword(s): IFR49, brainvisa, CEA MIRCen, BrainRAT. [bibtex-entry]


  41. G. Operto, R. Bulot, J.-L. Anton, and O. Coulon. Anatomically informed convolution kernels for the projection of fMRI data on the cortical surface. In MICCAI, volume 4191, Copenhaguen, Denmark, pages 300-307, 2006. Springer-Verlag. Keyword(s): IFR49, brainvisa, cortical_surface, U797, U610, LSIS. [bibtex-entry]


  42. C. Rabrait, P. Ciuciu, C. Poupon, D. Le Bihan, and F. Lethimonnier. Temporal analysis of the BOLD response using high temporal resolution Echo Volumar Imaging. In Proc. 14th ISMRM, May 2006. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  43. C. Clouchoux, O. Coulon, D. Rivière, A. Cachia, J.-F. Mangin, and J. Régis. Anatomically constrained surface parameterization for cortical localization. In MICCAI'05, pages 344-351, 2005. Keyword(s): Sulci, LongConfPaper, brainvisa, cortical_surface, IFR49. [bibtex-entry]


  44. G. Douaud, C. Poupon, Y. Cointepas, J.-F. Mangin, V. Gaura, N. Golestani, P. Krystkowiak, C. Verny, P. Damier, A.-C. Bachoud-Lévi, P. Hantraye, and P. Remy. Diffusion tensor imaging (DTI) in Huntington's disease patients: analyses of fractional anisotropy (FA) maps and apparent diffusion coefficient (ADC) maps. In ISMRM Workshop on Methods for Quantitative Diffusion MRI of Human Brain, Lake Louise, Canada, 2005. Keyword(s): Diffusion, brainvisa, IFR49. [bibtex-entry]


  45. G. Douaud, C. Poupon, Y. Cointepas, J.-F. Mangin, V. Gaura, N. Golestani, P. Krystkowiak, C. Verny, P. Damier, A.-C. Bachoud-Lévi, P. Hantraye, and P. Remy. Diffusion tensor imaging (DTI) in Huntington's disease patients: analyses of fractional anisotropy (FA) maps and apparent diffusion coefficient (ADC) maps. In Proc. 11th HBM CD-Rom Neuroimage vol 26 (1), Toronto, Canada, 2005. Keyword(s): Diffusion, Anatomy, brainvisa, IFR49. [bibtex-entry]


  46. G. Douaud, C. Poupon, Y. Cointepas, J.-F. Mangin, V. Gaura, N. Golestani, P. Krystkowiak, C. Verny, P. Damier, A.-C. Bachoud-Lévi, P. Hantraye, and P. Remy. Diffusion tensor imaging in patients with early Huntington's disease reveals frontal and striatal abnormalities. In 57th Annual Meeting of the American Academy of Neurology, 2005. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  47. V. El Kouby, Y. Cointepas, C. Poupon, J.-B. Poline, and J.-F. Mangin. Main fiber tracks detection through classification of MR diffusion imaging data. In Proc. 11th HBM CD-Rom Neuroimage vol 26 (1), Toronto, Canada, 2005. Keyword(s): Diffusion, brainvisa, IFR49. [bibtex-entry]


  48. V. El Kouby, Y. Cointepas, C. Poupon, D. Rivière, N. Golestani, J.-B. Poline, D. Le Bihan, and J.-F. Mangin. MR Diffusion-Based Inference of a Fiber Bundle Model from a Population of Subjects. In MICCAI'05, pages 196-204, 2005. Keyword(s): Diffusion, LongConfPaper, brainvisa, IFR49. [bibtex-entry]


  49. C. Clouchoux, O. Coulon, A. Cachia, D. Rivière, J.-F. Mangin, and J. Régis. Towards an anatomically meaningful parameterization of the cortical surface. In MICCAI, volume 3216 of Lecture Notes in Computer Science, St-Malo, France, pages 1046-1047, 2004. Springer-Verlag. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  50. A. Roche, P.-J. Lahaye, and J.-B. Poline. Incremental Activation Detection in fMRI Series using Kalman Filtering. In Proc. 2st Proc. IEEE ISBI, Arlington, VA, pages 376-379, Apr. 2004. Keyword(s): fMRI, brainvisa, IFR49. [bibtex-entry]


  51. Y. Cointepas, C. Poupon, R. Maroy, D. Rivière, D. Le Bihan, and J.-F. Mangin. A freely available Anatomist/BrainVISA package for analysis of diffusion MR images. In Proc. 9th HBM CD-Rom Neuroimage vol 19 (2), New York,, June19--22 2003. Keyword(s): brainvisa, IFR49. [bibtex-entry]


  52. D. Rivière, J. Régis, Y. Cointepas, D. Papadopoulos-Orfanos, A. Cachia, and J.-F. Mangin. A freely available Anatomist/BrainVISA package for structural morphometry of the cortical sulci. In Proc. 9th HBM, Neuroimage 19(2), New York,, pages 934, 2003. Keyword(s): brainvisa, IFR49. [bibtex-entry]


Internal reports

  1. P. Ciuciu and S. Donnet. Bayesian model comparison and selection in neuroimaging from JDE results. Research Rep., LNAO, NeuroSpin/CEA, Gif-sur-Yvette, France, May 2010. Keyword(s): brainvisa, IFR49. [bibtex-entry]



BACK TO INDEX


Disclaimer:

This material is presented to ensure timely dissemination of scholarly and technical work. Copyright and all rights therein are retained by authors or by other copyright holders. All person copying this information are expected to adhere to the terms and constraints invoked by each author's copyright. In most cases, these works may not be reposted without the explicit permission of the copyright holder.


Last modified: Fri Feb 3 17:52:52 2012

This document was translated from BibTEX by bibtex2html